Custom - Visualise Transcriptomic Counts In Html TableΒΆ

Take transcriptomic counts from several samples and merge them together into a single table.

Location

  • Filepath: <SnakeLines_dir>/rules/paired_end/classification/report/transcripts/html_table/custom.snake
  • Rule name: custom__visualise_transcriptomic_counts_in_html_table

Input(s):

  • table: TSV table with statistical evaluation of change in expression
  • desc: Description of reference sequences
  • template: HTML template with basic report outline
  • annotations: TSV files with attributes for annotated transcripts

Output(s):

  • html: HTML page with sortable, filterable table of transcriptomic results