Custom - Prepare Description File

Extract ID and description from input reference sequences in FASTA format. Assuming that id is the first word after ‘>’.

Location

  • Filepath: <SnakeLines_dir>/rules/shared/reference/attributes/desc/custom.snake
  • Rule name: custom__prepare_description_file

Input(s):

  • reference: Genomic sequences in FASTA format

Output(s):

  • desc: Description TSV file - 1st column is id of sequence, 2nd is description