Iqtree - Infer PhylogenyΒΆ
Infer phylogenetic relationships between aligned sequences
Location
- Filepath: <SnakeLines_dir>/rules/shared/reference/phylogeny/iqtree.snake
- Rule name: iqtree__infer_phylogeny
Input(s):
- alignment: Aligned sequences in ALN format
Output(s):
- tree: Phylogenetic tree with distances between sequences
Param(s):
- model: Model to use for phylo tree generation - see iqtree documentation for more detail