Sklearn - Pca ComparisonΒΆ

Visualise relationship between analysed samples as two-dimensional graphical plot (PCA reduction)

Location

  • Filepath: <SnakeLines_dir>/rules/paired_end/classification/report/transcripts/pca/sklearn.snake
  • Rule name: sklearn__pca_comparison

Input(s):

  • counts: Aggregated counts for each transcript and sample in tabular format

Output(s):

  • pca: 2D plot of analysed count vectors