Samtools - Prepare Fai IndexΒΆ

Index fasta file to quicker retrieve substring sequences

Location

  • Filepath: <SnakeLines_dir>/rules/shared/reference/index/fai/samtools.snake
  • Rule name: samtools__prepare_fai_index

Input(s):

  • reference: Genomic sequence file in fasta format to index

Output(s):

  • dict: Index for the input reference genomic file