Virfinder - Identify Viral Sequences

Method assigns each contig p-value that it originates from viral genome.

Location

• Filepath: <SnakeLines_dir>/rules/paired_end/classification/viral/identification/virfinder.snake
• Rule name: virfinder__identify_viral_sequences

Input(s):

• fasta: Genomics sequences to be analysed in fasta format

Output(s):

• pvalues: Probabilities that genomic sequence originates from a virus