Custom - Export De Genes For RevigoΒΆ

Export differentially expressed genes and their GO annotations in format suitable for visualization in the Revigo webpage (http://revigo.irb.hr/)

Location

  • Filepath: <SnakeLines_dir>/rules/paired_end/classification/report/transcripts/revigo/custom.snake
  • Rule name: custom__export_de_genes_for_revigo

Input(s):

  • des: TSV table with DE genes
  • gos: Annotation of genes - TSV file with columns id and external_id